deepcell-tf
DeepCell-tf, built on TensorFlow 2, is a deep learning library focused on single-cell analysis in biological images. It offers solutions for cell segmentation and tracking in 2D and 3D images, suitable for both multiplexed tissue and live-cell imaging data. As part of the DeepCell ecosystem from the Van Valen Lab, it works seamlessly with tools like DeepCell Toolbox and DeepCell Kiosk, supporting pre/post-processing and cloud deployments, respectively.