pytorch-3dunet
This PyTorch-based implementation supports 3D and 2D U-Nets, including variants like Residual 3D U-Net enhanced with Squeeze-and-Excitation blocks. It's designed for precise semantic segmentation and regression on medical and biological datasets. The tool accommodates multi-channel inputs, various loss functions for imbalanced data, and integrates smoothly with NVIDIA GPUs to boost training efficiency. With YAML configuration, it offers adaptable training and prediction processes across different platforms, such as Windows and OS X. Discover examples demonstrating its precision in cell segmentation, beneficial for enhancing research results.